Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Vsx2Q61412 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.09□□□□□ -0.15
Vsx2Q61412 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.09□□□□□ -0.15
Vsx2Q61412 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.09□□□□□ -0.15
Vsx2Q61412 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vsx2Q61412 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.09□□□□□ -0.15
Vsx2Q61412 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.09□□□□□ -0.15
Vsx2Q61412 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vsx2Q61412 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx2Q61412 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vsx2Q61412 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vsx2Q61412 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vsx2Q61412 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.08□□□□□ -0.15
Vsx2Q61412 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Vsx2Q61412 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vsx2Q61412 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Vsx2Q61412 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Vsx2Q61412 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Vsx2Q61412 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx2Q61412 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx2Q61412 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx2Q61412 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx2Q61412 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.08□□□□□ -0.16
Vsx2Q61412 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.08□□□□□ -0.16
Vsx2Q61412 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx2Q61412 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Vsx2Q61412 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.08□□□□□ -0.16
Vsx2Q61412 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx2Q61412 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx2Q61412 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vsx2Q61412 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx2Q61412 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vsx2Q61412 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx2Q61412 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.08□□□□□ -0.16
Vsx2Q61412 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx2Q61412 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vsx2Q61412 Carlr-201ENSMUST00000181515 2574 ntBASIC14.08□□□□□ -0.16
Vsx2Q61412 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx2Q61412 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx2Q61412 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Vsx2Q61412 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Vsx2Q61412 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.07□□□□□ -0.16
Vsx2Q61412 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
Vsx2Q61412 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vsx2Q61412 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.07□□□□□ -0.16
Vsx2Q61412 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vsx2Q61412 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.07□□□□□ -0.16
Vsx2Q61412 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Vsx2Q61412 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx2Q61412 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Vsx2Q61412 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Vsx2Q61412 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms