Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Mre11Q61216 Gm10013-201ENSMUST00000106074 672 ntBASIC17.29■□□□□ 0.36
Mre11Q61216 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Mre11Q61216 Gm12497-201ENSMUST00000138778 237 ntBASIC17.29■□□□□ 0.36
Mre11Q61216 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Rprl3-201ENSMUST00000157400 290 ntBASIC17.29■□□□□ 0.36
Mre11Q61216 Gm25925-201ENSMUST00000158314 306 ntBASIC17.29■□□□□ 0.36
Mre11Q61216 Gm9726-201ENSMUST00000180321 678 ntBASIC17.29■□□□□ 0.36
Mre11Q61216 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.29■□□□□ 0.36
Mre11Q61216 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Mre11Q61216 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.29■□□□□ 0.36
Mre11Q61216 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mre11Q61216 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC17.28■□□□□ 0.36
Mre11Q61216 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Gm8749-201ENSMUST00000117737 331 ntBASIC17.28■□□□□ 0.36
Mre11Q61216 Gm4459-201ENSMUST00000118750 468 ntBASIC17.28■□□□□ 0.36
Mre11Q61216 Gm14042-201ENSMUST00000120139 833 ntBASIC17.28■□□□□ 0.36
Mre11Q61216 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.28■□□□□ 0.36
Mre11Q61216 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Gm8584-201ENSMUST00000171982 758 ntBASIC17.28■□□□□ 0.36
Mre11Q61216 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Mre11Q61216 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.28■□□□□ 0.36
Mre11Q61216 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Mre11Q61216 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Mre11Q61216 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Mre11Q61216 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Mre11Q61216 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mre11Q61216 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mre11Q61216 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mre11Q61216 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mre11Q61216 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Mre11Q61216 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mre11Q61216 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mre11Q61216 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Mre11Q61216 Gm15794-201ENSMUST00000120182 631 ntBASIC17.27■□□□□ 0.36
Mre11Q61216 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.27■□□□□ 0.36
Mre11Q61216 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Mre11Q61216 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mre11Q61216 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mre11Q61216 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.27■□□□□ 0.36
Mre11Q61216 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mre11Q61216 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Mre11Q61216 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mre11Q61216 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Mre11Q61216 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC17.27■□□□□ 0.35
Mre11Q61216 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Mre11Q61216 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Mre11Q61216 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Mre11Q61216 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Mre11Q61216 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.26■□□□□ 0.35
Mre11Q61216 Gm6659-201ENSMUST00000174752 547 ntBASIC17.26■□□□□ 0.35
Mre11Q61216 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms