Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ClpbQ60649 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.85□□□□□ -0.19
ClpbQ60649 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ClpbQ60649 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ClpbQ60649 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.85□□□□□ -0.19
ClpbQ60649 Gm6973-201ENSMUST00000117080 721 ntBASIC13.85□□□□□ -0.19
ClpbQ60649 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Gm43125-201ENSMUST00000201724 730 ntBASIC13.85□□□□□ -0.19
ClpbQ60649 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.85□□□□□ -0.19
ClpbQ60649 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.85□□□□□ -0.19
ClpbQ60649 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ClpbQ60649 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClpbQ60649 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.85□□□□□ -0.19
ClpbQ60649 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ClpbQ60649 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
ClpbQ60649 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.84□□□□□ -0.19
ClpbQ60649 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.84□□□□□ -0.19
ClpbQ60649 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.84□□□□□ -0.19
ClpbQ60649 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.84□□□□□ -0.19
ClpbQ60649 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
ClpbQ60649 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ClpbQ60649 Gm15920-201ENSMUST00000118998 402 ntBASIC13.84□□□□□ -0.19
ClpbQ60649 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ClpbQ60649 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.84□□□□□ -0.19
ClpbQ60649 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
ClpbQ60649 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ClpbQ60649 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.84□□□□□ -0.19
ClpbQ60649 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
ClpbQ60649 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClpbQ60649 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
ClpbQ60649 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
ClpbQ60649 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ClpbQ60649 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.83□□□□□ -0.2
ClpbQ60649 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ClpbQ60649 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
ClpbQ60649 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.83□□□□□ -0.2
ClpbQ60649 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.83□□□□□ -0.2
ClpbQ60649 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.83□□□□□ -0.2
ClpbQ60649 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Gm43474-201ENSMUST00000196415 774 ntBASIC13.83□□□□□ -0.2
ClpbQ60649 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClpbQ60649 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.83□□□□□ -0.2
ClpbQ60649 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms