Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx49Q4FZF3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx49Q4FZF3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx49Q4FZF3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx49Q4FZF3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx49Q4FZF3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx49Q4FZF3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ddx49Q4FZF3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx49Q4FZF3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx49Q4FZF3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.75■□□□□ 0.27
Ddx49Q4FZF3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Gm37230-201ENSMUST00000194491 818 ntBASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Gm6916-202ENSMUST00000205523 195 ntBASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx49Q4FZF3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms