Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap2Q3V1H1 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Gm44608-201ENSMUST00000206827 855 ntBASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap2Q3V1H1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Gm25948-201ENSMUST00000175334 112 ntBASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ckap2Q3V1H1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ckap2Q3V1H1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Gm16476-201ENSMUST00000221544 139 ntBASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Dupd1-202ENSMUST00000224735 548 ntBASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap2Q3V1H1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms