Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Gm24196-201ENSMUST00000179161 110 ntBASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Mir8109-201ENSMUST00000184375 117 ntBASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Gm37714-201ENSMUST00000194742 342 ntBASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Gm38671-201ENSMUST00000200573 130 ntBASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Gm7783-201ENSMUST00000204795 781 ntBASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Gm9823-201ENSMUST00000051212 327 ntBASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Gm10012-201ENSMUST00000078252 192 ntBASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Fam196aQ3USH1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fam196aQ3USH1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Gm19184-201ENSMUST00000196798 928 ntBASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Gm19078-201ENSMUST00000206311 727 ntBASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fam196aQ3USH1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms