Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Mir1943-201ENSMUST00000158276 73 ntBASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Gm9550-201ENSMUST00000161130 862 ntBASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Gm20426-201ENSMUST00000173657 440 ntBASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Gm5051-201ENSMUST00000204085 485 ntBASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm14130-201ENSMUST00000118417 987 ntBASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.14□□□□□ -0.31
Spg11Q3UHA3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm44545-201ENSMUST00000208262 746 ntBASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm16479-201ENSMUST00000121706 932 ntBASIC13.14□□□□□ -0.31
Spg11Q3UHA3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm18212-201ENSMUST00000211678 889 ntBASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Spg11Q3UHA3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Gm11331-201ENSMUST00000119764 288 ntBASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Olfr286-202ENSMUST00000205305 969 ntBASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Spg11Q3UHA3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Gm15371-201ENSMUST00000117057 784 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms