Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.9■□□□□ 0.3
Col5a2Q3U962 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Col5a2Q3U962 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a2Q3U962 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Col5a2Q3U962 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col5a2Q3U962 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.89■□□□□ 0.3
Col5a2Q3U962 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Gm10156-201ENSMUST00000122364 462 ntBASIC16.89■□□□□ 0.29
Col5a2Q3U962 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Gm22331-201ENSMUST00000158066 136 ntBASIC16.89■□□□□ 0.29
Col5a2Q3U962 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.89■□□□□ 0.29
Col5a2Q3U962 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Gm43758-201ENSMUST00000199500 367 ntBASIC16.89■□□□□ 0.29
Col5a2Q3U962 AC133598.1-201ENSMUST00000224327 660 ntBASIC16.89■□□□□ 0.29
Col5a2Q3U962 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a2Q3U962 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.88■□□□□ 0.29
Col5a2Q3U962 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.88■□□□□ 0.29
Col5a2Q3U962 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Gm27772-201ENSMUST00000184900 187 ntBASIC16.88■□□□□ 0.29
Col5a2Q3U962 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Gm43818-201ENSMUST00000200605 466 ntBASIC16.88■□□□□ 0.29
Col5a2Q3U962 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Gm24526-201ENSMUST00000082921 158 ntBASIC16.88■□□□□ 0.29
Col5a2Q3U962 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a2Q3U962 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Col5a2Q3U962 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Gm8213-201ENSMUST00000118191 441 ntBASIC16.87■□□□□ 0.29
Col5a2Q3U962 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Gm37259-201ENSMUST00000193903 849 ntBASIC16.87■□□□□ 0.29
Col5a2Q3U962 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.87■□□□□ 0.29
Col5a2Q3U962 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.87■□□□□ 0.29
Col5a2Q3U962 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.87■□□□□ 0.29
Col5a2Q3U962 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a2Q3U962 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col5a2Q3U962 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms