Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Q3U1D9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Q3U1D9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Q3U1D9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Q3U1D9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Q3U1D9 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.52□□□□□ -0.4
Q3U1D9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Q3U1D9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Q3U1D9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Q3U1D9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Q3U1D9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Q3U1D9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Q3U1D9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.52□□□□□ -0.41
Q3U1D9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.52□□□□□ -0.41
Q3U1D9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Q3U1D9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.52□□□□□ -0.41
Q3U1D9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.52□□□□□ -0.41
Q3U1D9 Gm7730-201ENSMUST00000212486 454 ntBASIC12.52□□□□□ -0.41
Q3U1D9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Gm9229-201ENSMUST00000222777 126 ntBASIC12.52□□□□□ -0.41
Q3U1D9 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.52□□□□□ -0.41
Q3U1D9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Q3U1D9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Q3U1D9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q3U1D9 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.51□□□□□ -0.41
Q3U1D9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Q3U1D9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Q3U1D9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.51□□□□□ -0.41
Q3U1D9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Q3U1D9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Q3U1D9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Q3U1D9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Q3U1D9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Q3U1D9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Gm10275-202ENSMUST00000168697 495 ntBASIC12.51□□□□□ -0.41
Q3U1D9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.51□□□□□ -0.41
Q3U1D9 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.51□□□□□ -0.41
Q3U1D9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Gm10275-201ENSMUST00000092620 635 ntBASIC12.51□□□□□ -0.41
Q3U1D9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Syt7-204ENSMUST00000223586 1344 ntBASIC12.51□□□□□ -0.41
Q3U1D9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.51□□□□□ -0.41
Q3U1D9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Q3U1D9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.5□□□□□ -0.41
Q3U1D9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Q3U1D9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Gm14042-201ENSMUST00000120139 833 ntBASIC12.5□□□□□ -0.41
Q3U1D9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.5□□□□□ -0.41
Q3U1D9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.5□□□□□ -0.41
Q3U1D9 Gm16215-201ENSMUST00000161990 637 ntBASIC12.5□□□□□ -0.41
Q3U1D9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Q3U1D9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms