Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Khdc4Q3TCX3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Gm38294-201ENSMUST00000192831 381 ntBASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Khdc4Q3TCX3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Gm13223-201ENSMUST00000118609 747 ntBASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Khdc4Q3TCX3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Gm15693-201ENSMUST00000120470 637 ntBASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Gm43767-201ENSMUST00000198933 381 ntBASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms