Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Gm10051-201ENSMUST00000145209 414 ntBASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 AC126799.1-201ENSMUST00000221976 246 ntBASIC7.47□□□□□ -1.21
Ush2AQ2QI47 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 AC139054.1-201ENSMUST00000226898 1598 ntBASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Gm43352-201ENSMUST00000196419 3065 ntBASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Gm13888-201ENSMUST00000119148 422 ntBASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC7.47□□□□□ -1.21
Ush2AQ2QI47 Gm30285-201ENSMUST00000214614 422 ntBASIC7.47□□□□□ -1.21
Ush2AQ2QI47 AC159103.1-201ENSMUST00000228325 429 ntBASIC7.47□□□□□ -1.21
Ush2AQ2QI47 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC7.46□□□□□ -1.21
Ush2AQ2QI47 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Ush2AQ2QI47 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ush2AQ2QI47 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Ush2AQ2QI47 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ush2AQ2QI47 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.21
Ush2AQ2QI47 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC7.46□□□□□ -1.21
Ush2AQ2QI47 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC7.46□□□□□ -1.21
Ush2AQ2QI47 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
Ush2AQ2QI47 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ush2AQ2QI47 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ush2AQ2QI47 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Gm34023-201ENSMUST00000195539 217 ntBASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Gm5781-201ENSMUST00000219792 443 ntBASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Gm12165-201ENSMUST00000117047 342 ntBASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Gm4862-201ENSMUST00000170405 438 ntBASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Gm18734-201ENSMUST00000172937 808 ntBASIC7.46□□□□□ -1.22
Ush2AQ2QI47 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ush2AQ2QI47 Gm6944-201ENSMUST00000182449 1006 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms