Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col10a1Q05306 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col10a1Q05306 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col10a1Q05306 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col10a1Q05306 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col10a1Q05306 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.31□□□□□ -0.28
Col10a1Q05306 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.31□□□□□ -0.28
Col10a1Q05306 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Col10a1Q05306 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.31□□□□□ -0.28
Col10a1Q05306 Gm5312-201ENSMUST00000203728 547 ntBASIC13.31□□□□□ -0.28
Col10a1Q05306 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.31□□□□□ -0.28
Col10a1Q05306 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.31□□□□□ -0.28
Col10a1Q05306 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col10a1Q05306 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.31□□□□□ -0.28
Col10a1Q05306 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Col10a1Q05306 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col10a1Q05306 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col10a1Q05306 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col10a1Q05306 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.3□□□□□ -0.28
Col10a1Q05306 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.3□□□□□ -0.28
Col10a1Q05306 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.3□□□□□ -0.28
Col10a1Q05306 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col10a1Q05306 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col10a1Q05306 Gm25287-201ENSMUST00000103846 110 ntBASIC13.3□□□□□ -0.28
Col10a1Q05306 Gm22918-201ENSMUST00000103855 110 ntBASIC13.3□□□□□ -0.28
Col10a1Q05306 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Col10a1Q05306 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.3□□□□□ -0.28
Col10a1Q05306 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.3□□□□□ -0.28
Col10a1Q05306 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Col10a1Q05306 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Col10a1Q05306 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.3□□□□□ -0.28
Col10a1Q05306 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.3□□□□□ -0.28
Col10a1Q05306 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col10a1Q05306 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col10a1Q05306 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.3□□□□□ -0.28
Col10a1Q05306 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col10a1Q05306 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col10a1Q05306 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col10a1Q05306 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Col10a1Q05306 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.29□□□□□ -0.28
Col10a1Q05306 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Col10a1Q05306 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.29□□□□□ -0.28
Col10a1Q05306 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.29□□□□□ -0.28
Col10a1Q05306 Gm24158-201ENSMUST00000175263 71 ntBASIC13.29□□□□□ -0.28
Col10a1Q05306 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col10a1Q05306 Gm8396-201ENSMUST00000057361 823 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms