Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox9Q04887 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.83□□□□□ -0.04
Sox9Q04887 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox9Q04887 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox9Q04887 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox9Q04887 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox9Q04887 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox9Q04887 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox9Q04887 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox9Q04887 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox9Q04887 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Sox9Q04887 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Sox9Q04887 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox9Q04887 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox9Q04887 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox9Q04887 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.82□□□□□ -0.04
Sox9Q04887 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox9Q04887 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
Sox9Q04887 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.82□□□□□ -0.04
Sox9Q04887 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.82□□□□□ -0.04
Sox9Q04887 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.82□□□□□ -0.04
Sox9Q04887 Gm37230-201ENSMUST00000194491 818 ntBASIC14.82□□□□□ -0.04
Sox9Q04887 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox9Q04887 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Prob1-201ENSMUST00000097619 3021 ntBASIC14.82□□□□□ -0.04
Sox9Q04887 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sox9Q04887 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Sox9Q04887 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox9Q04887 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox9Q04887 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sox9Q04887 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Sox9Q04887 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox9Q04887 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sox9Q04887 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sox9Q04887 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.81□□□□□ -0.04
Sox9Q04887 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Gm23931-201ENSMUST00000103842 109 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox9Q04887 Gm12928-201ENSMUST00000117115 573 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Gm12384-201ENSMUST00000119228 919 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Gm15429-201ENSMUST00000151268 798 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox9Q04887 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Gm43822-201ENSMUST00000200285 476 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Gm3786-201ENSMUST00000202659 378 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Gm3961-201ENSMUST00000204425 994 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Gm18054-201ENSMUST00000207539 555 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Gm40466-201ENSMUST00000212174 422 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.81□□□□□ -0.04
Sox9Q04887 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox9Q04887 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sox9Q04887 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.81□□□□□ -0.04
Sox9Q04887 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.81□□□□□ -0.04
Sox9Q04887 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox9Q04887 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.81□□□□□ -0.04
Sox9Q04887 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox9Q04887 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sox9Q04887 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Sox9Q04887 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sox9Q04887 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox9Q04887 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox9Q04887 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox9Q04887 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox9Q04887 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms