Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Smn1P97801 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smn1P97801 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smn1P97801 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.38□□□□□ -0.43
Smn1P97801 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Smn1P97801 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smn1P97801 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Smn1P97801 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.37□□□□□ -0.43
Smn1P97801 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smn1P97801 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.37□□□□□ -0.43
Smn1P97801 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.37□□□□□ -0.43
Smn1P97801 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smn1P97801 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smn1P97801 Gm25990-201ENSMUST00000102440 86 ntBASIC12.37□□□□□ -0.43
Smn1P97801 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.37□□□□□ -0.43
Smn1P97801 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.37□□□□□ -0.43
Smn1P97801 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.37□□□□□ -0.43
Smn1P97801 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.37□□□□□ -0.43
Smn1P97801 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.37□□□□□ -0.43
Smn1P97801 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smn1P97801 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.36□□□□□ -0.43
Smn1P97801 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Smn1P97801 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Smn1P97801 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.36□□□□□ -0.43
Smn1P97801 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smn1P97801 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.36□□□□□ -0.43
Smn1P97801 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.36□□□□□ -0.43
Smn1P97801 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.36□□□□□ -0.43
Smn1P97801 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.36□□□□□ -0.43
Smn1P97801 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Smn1P97801 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Smn1P97801 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smn1P97801 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smn1P97801 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smn1P97801 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms