Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx3-2P97503 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.65□□□□□ -0.22
Nkx3-2P97503 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.65□□□□□ -0.22
Nkx3-2P97503 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Gm27622-201ENSMUST00000183779 60 ntBASIC13.65□□□□□ -0.22
Nkx3-2P97503 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.65□□□□□ -0.22
Nkx3-2P97503 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.65□□□□□ -0.22
Nkx3-2P97503 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.65□□□□□ -0.22
Nkx3-2P97503 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx3-2P97503 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nkx3-2P97503 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Nkx3-2P97503 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nkx3-2P97503 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nkx3-2P97503 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.65□□□□□ -0.23
Nkx3-2P97503 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.64□□□□□ -0.23
Nkx3-2P97503 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Gm5479-201ENSMUST00000160578 435 ntBASIC13.64□□□□□ -0.23
Nkx3-2P97503 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Gm20949-201ENSMUST00000206478 952 ntBASIC13.64□□□□□ -0.23
Nkx3-2P97503 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.64□□□□□ -0.23
Nkx3-2P97503 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx3-2P97503 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms