Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
PrkdcP97313 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Gm11439-201ENSMUST00000118598 409 ntBASIC9.61□□□□□ -0.87
PrkdcP97313 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
PrkdcP97313 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Gm37922-201ENSMUST00000195596 455 ntBASIC9.61□□□□□ -0.87
PrkdcP97313 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC9.61□□□□□ -0.87
PrkdcP97313 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
PrkdcP97313 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.61□□□□□ -0.87
PrkdcP97313 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.61□□□□□ -0.87
PrkdcP97313 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC9.61□□□□□ -0.87
PrkdcP97313 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC9.61□□□□□ -0.87
PrkdcP97313 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
PrkdcP97313 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
PrkdcP97313 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
PrkdcP97313 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.61□□□□□ -0.87
PrkdcP97313 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Gm43378-201ENSMUST00000199336 582 ntBASIC9.61□□□□□ -0.87
PrkdcP97313 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.61□□□□□ -0.87
PrkdcP97313 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.61□□□□□ -0.87
PrkdcP97313 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC9.61□□□□□ -0.87
PrkdcP97313 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
PrkdcP97313 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Gm12217-201ENSMUST00000118858 696 ntBASIC9.6□□□□□ -0.87
PrkdcP97313 Gm9550-201ENSMUST00000161130 862 ntBASIC9.6□□□□□ -0.87
PrkdcP97313 Gm16379-201ENSMUST00000161469 348 ntBASIC9.6□□□□□ -0.87
PrkdcP97313 Gm8762-201ENSMUST00000193486 339 ntBASIC9.6□□□□□ -0.87
PrkdcP97313 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
PrkdcP97313 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.6□□□□□ -0.87
PrkdcP97313 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
PrkdcP97313 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC9.6□□□□□ -0.87
PrkdcP97313 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
PrkdcP97313 AC159196.2-201ENSMUST00000224082 1622 ntBASIC9.6□□□□□ -0.87
PrkdcP97313 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC9.6□□□□□ -0.87
PrkdcP97313 Gm27023-201ENSMUST00000182372 285 ntBASIC9.6□□□□□ -0.87
PrkdcP97313 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.6□□□□□ -0.87
PrkdcP97313 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC9.6□□□□□ -0.87
PrkdcP97313 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
PrkdcP97313 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.6□□□□□ -0.87
PrkdcP97313 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC9.6□□□□□ -0.87
PrkdcP97313 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC9.6□□□□□ -0.87
PrkdcP97313 Gm5069-202ENSMUST00000192714 1011 ntBASIC9.6□□□□□ -0.87
PrkdcP97313 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.6□□□□□ -0.87
PrkdcP97313 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
PrkdcP97313 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PrkdcP97313 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.59□□□□□ -0.87
PrkdcP97313 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
PrkdcP97313 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms