Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Trim43bP86448 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trim43bP86448 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim43bP86448 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.86□□□□□ -0.03
Trim43bP86448 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.86□□□□□ -0.03
Trim43bP86448 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim43bP86448 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trim43bP86448 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.86□□□□□ -0.03
Trim43bP86448 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.86□□□□□ -0.03
Trim43bP86448 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim43bP86448 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim43bP86448 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim43bP86448 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43bP86448 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trim43bP86448 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim43bP86448 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Trim43bP86448 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim43bP86448 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.85□□□□□ -0.03
Trim43bP86448 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim43bP86448 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.85□□□□□ -0.03
Trim43bP86448 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim43bP86448 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.85□□□□□ -0.03
Trim43bP86448 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.85□□□□□ -0.03
Trim43bP86448 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Trim43bP86448 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
Trim43bP86448 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.85□□□□□ -0.03
Trim43bP86448 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43bP86448 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim43bP86448 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim43bP86448 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trim43bP86448 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim43bP86448 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Gm17271-201ENSMUST00000165535 355 ntBASIC14.84□□□□□ -0.03
Trim43bP86448 Gm10499-201ENSMUST00000174094 934 ntBASIC14.84□□□□□ -0.03
Trim43bP86448 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim43bP86448 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim43bP86448 Gm10175-201ENSMUST00000086013 645 ntBASIC14.84□□□□□ -0.03
Trim43bP86448 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim43bP86448 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.84□□□□□ -0.03
Trim43bP86448 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43bP86448 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43bP86448 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43bP86448 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.83□□□□□ -0.03
Trim43bP86448 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43bP86448 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Trim43bP86448 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43bP86448 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms