Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.29□□□□□ -0.12
Crnkl1P63154 Gm7506-201ENSMUST00000207758 815 ntBASIC14.29□□□□□ -0.12
Crnkl1P63154 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.29□□□□□ -0.12
Crnkl1P63154 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Crnkl1P63154 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.29□□□□□ -0.12
Crnkl1P63154 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.29□□□□□ -0.12
Crnkl1P63154 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.29□□□□□ -0.12
Crnkl1P63154 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Crnkl1P63154 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.28□□□□□ -0.12
Crnkl1P63154 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.28□□□□□ -0.12
Crnkl1P63154 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.28□□□□□ -0.12
Crnkl1P63154 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.28□□□□□ -0.12
Crnkl1P63154 Gm5864-201ENSMUST00000202263 970 ntBASIC14.28□□□□□ -0.12
Crnkl1P63154 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Crnkl1P63154 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Crnkl1P63154 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.28□□□□□ -0.12
Crnkl1P63154 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Crnkl1P63154 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Crnkl1P63154 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Crnkl1P63154 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.27□□□□□ -0.12
Crnkl1P63154 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.27□□□□□ -0.12
Crnkl1P63154 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.27□□□□□ -0.12
Crnkl1P63154 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Crnkl1P63154 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Crnkl1P63154 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Crnkl1P63154 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.27□□□□□ -0.13
Crnkl1P63154 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Crnkl1P63154 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.27□□□□□ -0.13
Crnkl1P63154 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.27□□□□□ -0.13
Crnkl1P63154 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Crnkl1P63154 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.27□□□□□ -0.13
Crnkl1P63154 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Crnkl1P63154 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.27□□□□□ -0.13
Crnkl1P63154 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Crnkl1P63154 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Crnkl1P63154 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Crnkl1P63154 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Crnkl1P63154 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Crnkl1P63154 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Crnkl1P63154 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Crnkl1P63154 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Crnkl1P63154 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Crnkl1P63154 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Crnkl1P63154 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Crnkl1P63154 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Crnkl1P63154 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Crnkl1P63154 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Crnkl1P63154 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Crnkl1P63154 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Crnkl1P63154 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Crnkl1P63154 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Crnkl1P63154 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Crnkl1P63154 Gm4459-201ENSMUST00000118750 468 ntBASIC14.26□□□□□ -0.13
Crnkl1P63154 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Crnkl1P63154 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.26□□□□□ -0.13
Crnkl1P63154 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.26□□□□□ -0.13
Crnkl1P63154 Gm8655-201ENSMUST00000221159 852 ntBASIC14.26□□□□□ -0.13
Crnkl1P63154 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms