Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.34□□□□□ -0.75
Ube2d3P61079 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC10.34□□□□□ -0.75
Ube2d3P61079 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.34□□□□□ -0.75
Ube2d3P61079 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC10.34□□□□□ -0.75
Ube2d3P61079 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.34□□□□□ -0.75
Ube2d3P61079 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Ube2d3P61079 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Ube2d3P61079 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Ube2d3P61079 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ube2d3P61079 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.33□□□□□ -0.76
Ube2d3P61079 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.33□□□□□ -0.76
Ube2d3P61079 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ube2d3P61079 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.33□□□□□ -0.76
Ube2d3P61079 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Gm13036-201ENSMUST00000117799 748 ntBASIC10.33□□□□□ -0.76
Ube2d3P61079 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.33□□□□□ -0.76
Ube2d3P61079 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.33□□□□□ -0.76
Ube2d3P61079 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.33□□□□□ -0.76
Ube2d3P61079 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ube2d3P61079 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.33□□□□□ -0.76
Ube2d3P61079 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.33□□□□□ -0.76
Ube2d3P61079 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.33□□□□□ -0.76
Ube2d3P61079 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ube2d3P61079 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ube2d3P61079 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.33□□□□□ -0.76
Ube2d3P61079 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ube2d3P61079 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ube2d3P61079 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube2d3P61079 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube2d3P61079 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube2d3P61079 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ube2d3P61079 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms