Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.63□□□□□ -0.23
Nup43P59235 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.63□□□□□ -0.23
Nup43P59235 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Mir449b-201ENSMUST00000104833 80 ntBASIC13.63□□□□□ -0.23
Nup43P59235 Gm13015-201ENSMUST00000118674 204 ntBASIC13.63□□□□□ -0.23
Nup43P59235 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.63□□□□□ -0.23
Nup43P59235 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.63□□□□□ -0.23
Nup43P59235 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nup43P59235 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nup43P59235 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup43P59235 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nup43P59235 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nup43P59235 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Nup43P59235 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Nup43P59235 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nup43P59235 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nup43P59235 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nup43P59235 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nup43P59235 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nup43P59235 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.62□□□□□ -0.23
Nup43P59235 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.62□□□□□ -0.23
Nup43P59235 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup43P59235 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.62□□□□□ -0.23
Nup43P59235 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.62□□□□□ -0.23
Nup43P59235 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Nup43P59235 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nup43P59235 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nup43P59235 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nup43P59235 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.61□□□□□ -0.23
Nup43P59235 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.61□□□□□ -0.23
Nup43P59235 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Nup43P59235 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Gm10275-202ENSMUST00000168697 495 ntBASIC13.61□□□□□ -0.23
Nup43P59235 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.61□□□□□ -0.23
Nup43P59235 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.61□□□□□ -0.23
Nup43P59235 Gm10275-201ENSMUST00000092620 635 ntBASIC13.61□□□□□ -0.23
Nup43P59235 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.61□□□□□ -0.23
Nup43P59235 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nup43P59235 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup43P59235 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.6□□□□□ -0.23
Nup43P59235 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms