Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Mmp20P57748 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp20P57748 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.41■□□□□ 0.22
Mmp20P57748 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.41■□□□□ 0.22
Mmp20P57748 Gm27839-201ENSMUST00000184242 106 ntBASIC16.41■□□□□ 0.22
Mmp20P57748 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp20P57748 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.41■□□□□ 0.22
Mmp20P57748 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Sybu-209ENSMUST00000228639 4113 ntBASIC16.41■□□□□ 0.22
Mmp20P57748 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.41■□□□□ 0.22
Mmp20P57748 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Mmp20P57748 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Mmp20P57748 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Mmp20P57748 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp20P57748 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Mmp20P57748 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Mmp20P57748 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.4■□□□□ 0.22
Mmp20P57748 Gm12390-201ENSMUST00000117897 397 ntBASIC16.4■□□□□ 0.22
Mmp20P57748 Gm15240-201ENSMUST00000118156 720 ntBASIC16.4■□□□□ 0.22
Mmp20P57748 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.4■□□□□ 0.22
Mmp20P57748 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.4■□□□□ 0.22
Mmp20P57748 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.4■□□□□ 0.22
Mmp20P57748 Gm17794-201ENSMUST00000220252 955 ntBASIC16.4■□□□□ 0.22
Mmp20P57748 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.4■□□□□ 0.22
Mmp20P57748 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Mmp20P57748 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp20P57748 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.4■□□□□ 0.22
Mmp20P57748 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Mmp20P57748 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Mmp20P57748 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.39■□□□□ 0.21
Mmp20P57748 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Mmp20P57748 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Mmp20P57748 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Mmp20P57748 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Mmp20P57748 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.39■□□□□ 0.21
Mmp20P57748 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Mmp20P57748 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.39■□□□□ 0.21
Mmp20P57748 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp20P57748 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp20P57748 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp20P57748 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp20P57748 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms