Protein–RNA interactions for Protein: P56916

Gsc2, Homeobox protein goosecoid-2, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gsc2P56916 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gsc2P56916 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gsc2P56916 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gsc2P56916 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gsc2P56916 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
Gsc2P56916 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.13□□□□□ -0.47
Gsc2P56916 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.13□□□□□ -0.47
Gsc2P56916 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.13□□□□□ -0.47
Gsc2P56916 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.13□□□□□ -0.47
Gsc2P56916 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.13□□□□□ -0.47
Gsc2P56916 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.13□□□□□ -0.47
Gsc2P56916 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.13□□□□□ -0.47
Gsc2P56916 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Gsc2P56916 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Gsc2P56916 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.13□□□□□ -0.47
Gsc2P56916 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gsc2P56916 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Gsc2P56916 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.13□□□□□ -0.47
Gsc2P56916 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
Gsc2P56916 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.12□□□□□ -0.47
Gsc2P56916 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Gsc2P56916 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gsc2P56916 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Gsc2P56916 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.12□□□□□ -0.47
Gsc2P56916 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Gm7284-201ENSMUST00000131667 944 ntBASIC12.12□□□□□ -0.47
Gsc2P56916 Gm11780-201ENSMUST00000136880 516 ntBASIC12.12□□□□□ -0.47
Gsc2P56916 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.12□□□□□ -0.47
Gsc2P56916 Gm9726-201ENSMUST00000180321 678 ntBASIC12.12□□□□□ -0.47
Gsc2P56916 Gm4535-201ENSMUST00000182274 558 ntBASIC12.12□□□□□ -0.47
Gsc2P56916 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.12□□□□□ -0.47
Gsc2P56916 Gm7787-201ENSMUST00000216858 688 ntBASIC12.12□□□□□ -0.47
Gsc2P56916 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Gm10355-201ENSMUST00000097146 517 ntBASIC12.12□□□□□ -0.47
Gsc2P56916 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.12□□□□□ -0.47
Gsc2P56916 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gsc2P56916 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gsc2P56916 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.11□□□□□ -0.47
Gsc2P56916 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gsc2P56916 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Gsc2P56916 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gsc2P56916 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gsc2P56916 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gsc2P56916 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.11□□□□□ -0.47
Gsc2P56916 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gsc2P56916 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gsc2P56916 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gsc2P56916 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Gsc2P56916 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gsc2P56916 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms