Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lim2P56563 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Lim2P56563 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lim2P56563 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lim2P56563 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.44□□□□□ -0.1
Lim2P56563 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
Lim2P56563 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lim2P56563 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lim2P56563 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.44□□□□□ -0.1
Lim2P56563 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Gm9824-201ENSMUST00000178707 561 ntBASIC14.44□□□□□ -0.1
Lim2P56563 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.44□□□□□ -0.1
Lim2P56563 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.44□□□□□ -0.1
Lim2P56563 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.44□□□□□ -0.1
Lim2P56563 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
Lim2P56563 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lim2P56563 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lim2P56563 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.43□□□□□ -0.1
Lim2P56563 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.43□□□□□ -0.1
Lim2P56563 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Lim2P56563 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.43□□□□□ -0.1
Lim2P56563 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.43□□□□□ -0.1
Lim2P56563 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Gm25948-201ENSMUST00000175334 112 ntBASIC14.43□□□□□ -0.1
Lim2P56563 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.43□□□□□ -0.1
Lim2P56563 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.43□□□□□ -0.1
Lim2P56563 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.43□□□□□ -0.1
Lim2P56563 Gm9182-201ENSMUST00000217829 639 ntBASIC14.43□□□□□ -0.1
Lim2P56563 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.43□□□□□ -0.1
Lim2P56563 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.43□□□□□ -0.1
Lim2P56563 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Lim2P56563 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lim2P56563 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.42□□□□□ -0.1
Lim2P56563 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lim2P56563 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.42□□□□□ -0.1
Lim2P56563 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lim2P56563 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lim2P56563 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.42□□□□□ -0.1
Lim2P56563 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Gm13015-201ENSMUST00000118674 204 ntBASIC14.42□□□□□ -0.1
Lim2P56563 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.42□□□□□ -0.1
Lim2P56563 Gm13616-201ENSMUST00000120600 222 ntBASIC14.42□□□□□ -0.1
Lim2P56563 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Gm18049-201ENSMUST00000208909 581 ntBASIC14.42□□□□□ -0.1
Lim2P56563 Gm5779-201ENSMUST00000218467 910 ntBASIC14.42□□□□□ -0.1
Lim2P56563 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.42□□□□□ -0.1
Lim2P56563 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Lim2P56563 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms