Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Matn2-206ENSMUST00000228570 2798 ntBASIC13.83□□□□□ -0.2
Cdkn2bP55271 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdkn2bP55271 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cdkn2bP55271 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Cdkn2bP55271 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdkn2bP55271 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Gm45747-201ENSMUST00000212203 999 ntBASIC13.82□□□□□ -0.2
Cdkn2bP55271 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdkn2bP55271 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.81□□□□□ -0.2
Cdkn2bP55271 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.81□□□□□ -0.2
Cdkn2bP55271 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Gm15590-201ENSMUST00000078419 552 ntBASIC13.81□□□□□ -0.2
Cdkn2bP55271 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.81□□□□□ -0.2
Cdkn2bP55271 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cdkn2bP55271 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.81□□□□□ -0.2
Cdkn2bP55271 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.8□□□□□ -0.2
Cdkn2bP55271 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cdkn2bP55271 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn2bP55271 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn2bP55271 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cdkn2bP55271 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cdkn2bP55271 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn2bP55271 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn2bP55271 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.8□□□□□ -0.2
Cdkn2bP55271 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn2bP55271 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms