Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm12957-201ENSMUST00000117835 377 ntBASIC14.31□□□□□ -0.12
Atxn1P54254 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.31□□□□□ -0.12
Atxn1P54254 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.31□□□□□ -0.12
Atxn1P54254 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.31□□□□□ -0.12
Atxn1P54254 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.31□□□□□ -0.12
Atxn1P54254 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Mir1982-201ENSMUST00000157368 74 ntBASIC14.31□□□□□ -0.12
Atxn1P54254 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Atxn1P54254 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Gm9002-201ENSMUST00000178437 499 ntBASIC14.31□□□□□ -0.12
Atxn1P54254 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Atxn1P54254 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.31□□□□□ -0.12
Atxn1P54254 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.31□□□□□ -0.12
Atxn1P54254 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.31□□□□□ -0.12
Atxn1P54254 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.31□□□□□ -0.12
Atxn1P54254 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.31□□□□□ -0.12
Atxn1P54254 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.3□□□□□ -0.12
Atxn1P54254 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Efs-202ENSMUST00000227037 2540 ntBASIC14.3□□□□□ -0.12
Atxn1P54254 Gm14722-201ENSMUST00000118943 689 ntBASIC14.3□□□□□ -0.12
Atxn1P54254 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.3□□□□□ -0.12
Atxn1P54254 Mir6392-201ENSMUST00000184924 108 ntBASIC14.3□□□□□ -0.12
Atxn1P54254 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.3□□□□□ -0.12
Atxn1P54254 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.3□□□□□ -0.12
Atxn1P54254 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.3□□□□□ -0.12
Atxn1P54254 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.3□□□□□ -0.12
Atxn1P54254 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.3□□□□□ -0.12
Atxn1P54254 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Atxn1P54254 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Atxn1P54254 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atxn1P54254 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Atxn1P54254 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.29□□□□□ -0.12
Atxn1P54254 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.29□□□□□ -0.12
Atxn1P54254 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.29□□□□□ -0.12
Atxn1P54254 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.29□□□□□ -0.12
Atxn1P54254 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.29□□□□□ -0.12
Atxn1P54254 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Atxn1P54254 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atxn1P54254 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.28□□□□□ -0.12
Atxn1P54254 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.28□□□□□ -0.12
Atxn1P54254 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.28□□□□□ -0.12
Atxn1P54254 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.28□□□□□ -0.12
Atxn1P54254 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms