Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Gm6973-201ENSMUST00000117080 721 ntBASIC13.84□□□□□ -0.19
Sox3P53784 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.84□□□□□ -0.19
Sox3P53784 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.84□□□□□ -0.19
Sox3P53784 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Sox3P53784 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.84□□□□□ -0.19
Sox3P53784 Gm25144-201ENSMUST00000179561 110 ntBASIC13.84□□□□□ -0.19
Sox3P53784 Gm25352-201ENSMUST00000179815 110 ntBASIC13.84□□□□□ -0.19
Sox3P53784 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.84□□□□□ -0.19
Sox3P53784 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.84□□□□□ -0.19
Sox3P53784 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.84□□□□□ -0.19
Sox3P53784 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.84□□□□□ -0.19
Sox3P53784 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.84□□□□□ -0.19
Sox3P53784 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox3P53784 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sox3P53784 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.83□□□□□ -0.19
Sox3P53784 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sox3P53784 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sox3P53784 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sox3P53784 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox3P53784 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox3P53784 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox3P53784 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Sox3P53784 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sox3P53784 Gm9824-201ENSMUST00000178707 561 ntBASIC13.83□□□□□ -0.2
Sox3P53784 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sox3P53784 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.83□□□□□ -0.2
Sox3P53784 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox3P53784 Gm9063-201ENSMUST00000223299 582 ntBASIC13.83□□□□□ -0.2
Sox3P53784 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.83□□□□□ -0.2
Sox3P53784 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sox3P53784 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox3P53784 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox3P53784 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox3P53784 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox3P53784 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox3P53784 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox3P53784 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sox3P53784 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Sox3P53784 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.83□□□□□ -0.2
Sox3P53784 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.82□□□□□ -0.2
Sox3P53784 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Gm2810-201ENSMUST00000118681 990 ntBASIC13.82□□□□□ -0.2
Sox3P53784 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.82□□□□□ -0.2
Sox3P53784 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Sox3P53784 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.82□□□□□ -0.2
Sox3P53784 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox3P53784 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sox3P53784 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Gm44719-201ENSMUST00000206404 149 ntBASIC13.82□□□□□ -0.2
Sox3P53784 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.82□□□□□ -0.2
Sox3P53784 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox3P53784 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.82□□□□□ -0.2
Sox3P53784 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sox3P53784 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sox3P53784 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox3P53784 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.82□□□□□ -0.2
Sox3P53784 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox3P53784 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms