Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.18■□□□□ 0.18
Atoh1P48985 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.18■□□□□ 0.18
Atoh1P48985 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.18■□□□□ 0.18
Atoh1P48985 Gm37714-201ENSMUST00000194742 342 ntBASIC16.18■□□□□ 0.18
Atoh1P48985 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.18■□□□□ 0.18
Atoh1P48985 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Atoh1P48985 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.18■□□□□ 0.18
Atoh1P48985 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atoh1P48985 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.17■□□□□ 0.18
Atoh1P48985 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.17■□□□□ 0.18
Atoh1P48985 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Atoh1P48985 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.17■□□□□ 0.18
Atoh1P48985 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.17■□□□□ 0.18
Atoh1P48985 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.17■□□□□ 0.18
Atoh1P48985 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.17■□□□□ 0.18
Atoh1P48985 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.17■□□□□ 0.18
Atoh1P48985 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Atoh1P48985 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Atoh1P48985 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atoh1P48985 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Atoh1P48985 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Atoh1P48985 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.16■□□□□ 0.18
Atoh1P48985 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Gm15376-201ENSMUST00000122258 783 ntBASIC16.16■□□□□ 0.18
Atoh1P48985 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC16.16■□□□□ 0.18
Atoh1P48985 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.16■□□□□ 0.18
Atoh1P48985 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Atoh1P48985 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.16■□□□□ 0.18
Atoh1P48985 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Gm10012-201ENSMUST00000078252 192 ntBASIC16.16■□□□□ 0.18
Atoh1P48985 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Atoh1P48985 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Atoh1P48985 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Atoh1P48985 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Atoh1P48985 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Atoh1P48985 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Atoh1P48985 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atoh1P48985 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atoh1P48985 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atoh1P48985 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Atoh1P48985 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atoh1P48985 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atoh1P48985 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.15■□□□□ 0.18
Atoh1P48985 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.15■□□□□ 0.18
Atoh1P48985 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Atoh1P48985 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Atoh1P48985 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atoh1P48985 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Atoh1P48985 Gm13689-201ENSMUST00000119360 685 ntBASIC16.15■□□□□ 0.18
Atoh1P48985 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Atoh1P48985 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Atoh1P48985 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms