Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Gm9385-201ENSMUST00000117563 472 ntBASIC17.74■□□□□ 0.43
Nkx1-2P42580 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Gm45747-201ENSMUST00000212203 999 ntBASIC17.74■□□□□ 0.43
Nkx1-2P42580 Psmb5-202ENSMUST00000227257 622 ntBASIC17.74■□□□□ 0.43
Nkx1-2P42580 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Gm43570-201ENSMUST00000199951 3688 ntBASIC17.74■□□□□ 0.43
Nkx1-2P42580 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.74■□□□□ 0.43
Nkx1-2P42580 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Gm27301-201ENSMUST00000184012 127 ntBASIC17.73■□□□□ 0.43
Nkx1-2P42580 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Gm7461-201ENSMUST00000058918 827 ntBASIC17.73■□□□□ 0.43
Nkx1-2P42580 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-2P42580 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.72■□□□□ 0.43
Nkx1-2P42580 Gm27741-201ENSMUST00000185060 237 ntBASIC17.72■□□□□ 0.43
Nkx1-2P42580 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nkx1-2P42580 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.72■□□□□ 0.43
Nkx1-2P42580 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Nkx1-2P42580 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.71■□□□□ 0.43
Nkx1-2P42580 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx1-2P42580 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms