Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.99□□□□□ -0.17
TfamP40630 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TfamP40630 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.99□□□□□ -0.17
TfamP40630 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.99□□□□□ -0.17
TfamP40630 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TfamP40630 Thap2-203ENSMUST00000218989 527 ntBASIC13.99□□□□□ -0.17
TfamP40630 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TfamP40630 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.99□□□□□ -0.17
TfamP40630 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
TfamP40630 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TfamP40630 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
TfamP40630 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Gm5177-201ENSMUST00000183092 997 ntBASIC13.98□□□□□ -0.17
TfamP40630 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.98□□□□□ -0.17
TfamP40630 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.98□□□□□ -0.17
TfamP40630 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TfamP40630 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TfamP40630 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
TfamP40630 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.97□□□□□ -0.17
TfamP40630 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TfamP40630 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.97□□□□□ -0.17
TfamP40630 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.97□□□□□ -0.17
TfamP40630 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TfamP40630 Gm18733-201ENSMUST00000173950 856 ntBASIC13.97□□□□□ -0.17
TfamP40630 Gm27301-201ENSMUST00000184012 127 ntBASIC13.97□□□□□ -0.17
TfamP40630 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Mzt1-203ENSMUST00000227948 952 ntBASIC13.97□□□□□ -0.17
TfamP40630 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.97□□□□□ -0.17
TfamP40630 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.97□□□□□ -0.17
TfamP40630 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.97□□□□□ -0.17
TfamP40630 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TfamP40630 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TfamP40630 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TfamP40630 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.97□□□□□ -0.17
TfamP40630 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TfamP40630 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TfamP40630 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TfamP40630 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TfamP40630 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TfamP40630 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms