Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cdkn1aP39689 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdkn1aP39689 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.9□□□□□ -0.5
Cdkn1aP39689 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.9□□□□□ -0.5
Cdkn1aP39689 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.9□□□□□ -0.5
Cdkn1aP39689 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Gm27680-201ENSMUST00000184192 160 ntBASIC11.9□□□□□ -0.5
Cdkn1aP39689 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.9□□□□□ -0.5
Cdkn1aP39689 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.9□□□□□ -0.5
Cdkn1aP39689 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.9□□□□□ -0.5
Cdkn1aP39689 Gm46209-201ENSMUST00000217912 553 ntBASIC11.9□□□□□ -0.5
Cdkn1aP39689 Gm16476-201ENSMUST00000221544 139 ntBASIC11.9□□□□□ -0.5
Cdkn1aP39689 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn1aP39689 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdkn1aP39689 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Cdkn1aP39689 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdkn1aP39689 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Cdkn1aP39689 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.9□□□□□ -0.51
Cdkn1aP39689 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdkn1aP39689 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Gm7775-201ENSMUST00000218871 853 ntBASIC11.89□□□□□ -0.51
Cdkn1aP39689 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdkn1aP39689 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.89□□□□□ -0.51
Cdkn1aP39689 Carlr-201ENSMUST00000181515 2574 ntBASIC11.89□□□□□ -0.51
Cdkn1aP39689 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.89□□□□□ -0.51
Cdkn1aP39689 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.89□□□□□ -0.51
Cdkn1aP39689 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.89□□□□□ -0.51
Cdkn1aP39689 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn1aP39689 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cdkn1aP39689 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn1aP39689 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn1aP39689 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn1aP39689 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn1aP39689 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn1aP39689 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn1aP39689 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn1aP39689 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn1aP39689 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn1aP39689 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn1aP39689 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn1aP39689 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms