Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdh4P39038 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdh4P39038 Mir449b-201ENSMUST00000104833 80 ntBASIC13.82□□□□□ -0.2
Cdh4P39038 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.82□□□□□ -0.2
Cdh4P39038 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cdh4P39038 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdh4P39038 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.82□□□□□ -0.2
Cdh4P39038 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.82□□□□□ -0.2
Cdh4P39038 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdh4P39038 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.82□□□□□ -0.2
Cdh4P39038 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdh4P39038 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdh4P39038 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.81□□□□□ -0.2
Cdh4P39038 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdh4P39038 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdh4P39038 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.81□□□□□ -0.2
Cdh4P39038 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cdh4P39038 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cdh4P39038 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.81□□□□□ -0.2
Cdh4P39038 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.81□□□□□ -0.2
Cdh4P39038 Gm37230-201ENSMUST00000194491 818 ntBASIC13.81□□□□□ -0.2
Cdh4P39038 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdh4P39038 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh4P39038 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Cdh4P39038 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Carlr-201ENSMUST00000181515 2574 ntBASIC13.8□□□□□ -0.2
Cdh4P39038 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cdh4P39038 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cdh4P39038 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdh4P39038 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Cdh4P39038 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Cdh4P39038 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms