Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Rprl2-201ENSMUST00000157150 290 ntBASIC12.66□□□□□ -0.38
Upk2P38575 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.66□□□□□ -0.38
Upk2P38575 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.66□□□□□ -0.38
Upk2P38575 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk2P38575 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.66□□□□□ -0.38
Upk2P38575 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.66□□□□□ -0.38
Upk2P38575 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Upk2P38575 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Upk2P38575 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.65□□□□□ -0.38
Upk2P38575 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Upk2P38575 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.65□□□□□ -0.38
Upk2P38575 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.65□□□□□ -0.38
Upk2P38575 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.65□□□□□ -0.38
Upk2P38575 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.65□□□□□ -0.38
Upk2P38575 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.65□□□□□ -0.38
Upk2P38575 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Upk2P38575 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Upk2P38575 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Upk2P38575 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.65□□□□□ -0.38
Upk2P38575 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.65□□□□□ -0.38
Upk2P38575 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk2P38575 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Upk2P38575 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Upk2P38575 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.64□□□□□ -0.39
Upk2P38575 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Gm11745-201ENSMUST00000121669 448 ntBASIC12.64□□□□□ -0.39
Upk2P38575 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.64□□□□□ -0.39
Upk2P38575 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.64□□□□□ -0.39
Upk2P38575 Gm27494-201ENSMUST00000184735 189 ntBASIC12.64□□□□□ -0.39
Upk2P38575 Gm38225-201ENSMUST00000194001 393 ntBASIC12.64□□□□□ -0.39
Upk2P38575 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Upk2P38575 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Upk2P38575 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Upk2P38575 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Upk2P38575 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.64□□□□□ -0.39
Upk2P38575 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk2P38575 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk2P38575 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms