Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Foxa1P35582 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Gm22065-201ENSMUST00000103753 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm22066-201ENSMUST00000103761 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm24932-201ENSMUST00000103763 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm24115-201ENSMUST00000103799 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm22190-201ENSMUST00000103827 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm22191-201ENSMUST00000103831 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm24721-201ENSMUST00000103849 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm28018-201ENSMUST00000103869 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm26399-201ENSMUST00000103937 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm14701-201ENSMUST00000117156 348 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.34□□□□□ -0.27
Foxa1P35582 Gm24158-201ENSMUST00000175263 71 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm25349-201ENSMUST00000177728 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm23616-201ENSMUST00000177797 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm25871-201ENSMUST00000177816 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm24752-201ENSMUST00000178240 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm24496-201ENSMUST00000178287 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm25649-201ENSMUST00000178476 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm25548-201ENSMUST00000178681 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm23147-201ENSMUST00000178841 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm26095-201ENSMUST00000179270 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm22171-201ENSMUST00000179283 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm23936-201ENSMUST00000179354 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm22619-201ENSMUST00000179516 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm25255-201ENSMUST00000179579 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm24755-201ENSMUST00000179691 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm26506-201ENSMUST00000179692 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm25086-201ENSMUST00000179931 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm23243-201ENSMUST00000180047 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm24659-201ENSMUST00000180212 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm24169-201ENSMUST00000180244 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm23689-201ENSMUST00000180354 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm27359-201ENSMUST00000184153 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm27785-201ENSMUST00000184268 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm27466-201ENSMUST00000184396 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm27703-201ENSMUST00000184836 110 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm18049-201ENSMUST00000208909 581 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Gm8396-201ENSMUST00000057361 823 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.34□□□□□ -0.27
Foxa1P35582 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Foxa1P35582 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Foxa1P35582 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Foxa1P35582 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Foxa1P35582 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Foxa1P35582 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Foxa1P35582 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Foxa1P35582 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Foxa1P35582 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Foxa1P35582 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Foxa1P35582 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.33□□□□□ -0.28
Foxa1P35582 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Foxa1P35582 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Foxa1P35582 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Foxa1P35582 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Gm10253-201ENSMUST00000194270 940 ntBASIC13.32□□□□□ -0.28
Foxa1P35582 Gm7774-201ENSMUST00000200064 533 ntBASIC13.32□□□□□ -0.28
Foxa1P35582 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms