Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Sftpa1P35242 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sftpa1P35242 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Sftpa1P35242 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sftpa1P35242 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.27□□□□□ -0.29
Sftpa1P35242 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.27□□□□□ -0.29
Sftpa1P35242 Gm6244-201ENSMUST00000178732 841 ntBASIC13.27□□□□□ -0.29
Sftpa1P35242 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.27□□□□□ -0.29
Sftpa1P35242 Gm5279-201ENSMUST00000199575 745 ntBASIC13.27□□□□□ -0.29
Sftpa1P35242 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.27□□□□□ -0.29
Sftpa1P35242 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.27□□□□□ -0.29
Sftpa1P35242 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.27□□□□□ -0.29
Sftpa1P35242 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sftpa1P35242 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Sftpa1P35242 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sftpa1P35242 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.27□□□□□ -0.29
Sftpa1P35242 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sftpa1P35242 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sftpa1P35242 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.26□□□□□ -0.29
Sftpa1P35242 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.26□□□□□ -0.29
Sftpa1P35242 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.26□□□□□ -0.29
Sftpa1P35242 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Sftpa1P35242 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.26□□□□□ -0.29
Sftpa1P35242 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sftpa1P35242 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.26□□□□□ -0.29
Sftpa1P35242 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.26□□□□□ -0.29
Sftpa1P35242 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sftpa1P35242 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.25□□□□□ -0.29
Sftpa1P35242 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.25□□□□□ -0.29
Sftpa1P35242 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.25□□□□□ -0.29
Sftpa1P35242 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sftpa1P35242 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Prob1-201ENSMUST00000097619 3021 ntBASIC13.25□□□□□ -0.29
Sftpa1P35242 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.25□□□□□ -0.29
Sftpa1P35242 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Gm13392-201ENSMUST00000117708 150 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms