Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nedd8P29595 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nedd8P29595 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nedd8P29595 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nedd8P29595 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nedd8P29595 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nedd8P29595 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nedd8P29595 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nedd8P29595 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.33□□□□□ -0.28
Nedd8P29595 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Mir770-201ENSMUST00000103252 94 ntBASIC13.33□□□□□ -0.28
Nedd8P29595 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Nedd8P29595 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.33□□□□□ -0.28
Nedd8P29595 Gm13436-201ENSMUST00000120418 567 ntBASIC13.33□□□□□ -0.28
Nedd8P29595 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.33□□□□□ -0.28
Nedd8P29595 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Gm9172-201ENSMUST00000212092 954 ntBASIC13.33□□□□□ -0.28
Nedd8P29595 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.33□□□□□ -0.28
Nedd8P29595 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nedd8P29595 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nedd8P29595 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.33□□□□□ -0.28
Nedd8P29595 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nedd8P29595 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Nedd8P29595 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.32□□□□□ -0.28
Nedd8P29595 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nedd8P29595 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Nedd8P29595 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.32□□□□□ -0.28
Nedd8P29595 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.32□□□□□ -0.28
Nedd8P29595 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.32□□□□□ -0.28
Nedd8P29595 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Gm10499-201ENSMUST00000174094 934 ntBASIC13.32□□□□□ -0.28
Nedd8P29595 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.32□□□□□ -0.28
Nedd8P29595 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nedd8P29595 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.32□□□□□ -0.28
Nedd8P29595 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Nedd8P29595 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.32□□□□□ -0.28
Nedd8P29595 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nedd8P29595 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nedd8P29595 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nedd8P29595 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Nedd8P29595 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Nedd8P29595 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.31□□□□□ -0.28
Nedd8P29595 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.31□□□□□ -0.28
Nedd8P29595 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Gm13168-201ENSMUST00000121771 632 ntBASIC13.31□□□□□ -0.28
Nedd8P29595 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.31□□□□□ -0.28
Nedd8P29595 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.31□□□□□ -0.28
Nedd8P29595 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.31□□□□□ -0.28
Nedd8P29595 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.31□□□□□ -0.28
Nedd8P29595 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms