Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.33□□□□□ -0.28
Cd40lgP27548 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Cd40lgP27548 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Cd40lgP27548 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.33□□□□□ -0.28
Cd40lgP27548 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.33□□□□□ -0.28
Cd40lgP27548 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cd40lgP27548 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40lgP27548 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.32□□□□□ -0.28
Cd40lgP27548 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.32□□□□□ -0.28
Cd40lgP27548 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.32□□□□□ -0.28
Cd40lgP27548 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cd40lgP27548 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cd40lgP27548 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.32□□□□□ -0.28
Cd40lgP27548 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.32□□□□□ -0.28
Cd40lgP27548 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40lgP27548 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Cd40lgP27548 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cd40lgP27548 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.3□□□□□ -0.28
Cd40lgP27548 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.3□□□□□ -0.28
Cd40lgP27548 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cd40lgP27548 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cd40lgP27548 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cd40lgP27548 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms