Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdx1P18111 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdx1P18111 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.68□□□□□ -0.54
Cdx1P18111 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdx1P18111 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.68□□□□□ -0.54
Cdx1P18111 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Cdx1P18111 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx1P18111 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdx1P18111 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdx1P18111 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Cdx1P18111 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cdx1P18111 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.67□□□□□ -0.54
Cdx1P18111 Gm12350-201ENSMUST00000121208 462 ntBASIC11.67□□□□□ -0.54
Cdx1P18111 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.67□□□□□ -0.54
Cdx1P18111 Gm25745-201ENSMUST00000174945 133 ntBASIC11.67□□□□□ -0.54
Cdx1P18111 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.67□□□□□ -0.54
Cdx1P18111 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cdx1P18111 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Cdx1P18111 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Cdx1P18111 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cdx1P18111 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdx1P18111 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.66□□□□□ -0.54
Cdx1P18111 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cdx1P18111 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cdx1P18111 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.66□□□□□ -0.54
Cdx1P18111 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Cdx1P18111 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdx1P18111 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.66□□□□□ -0.54
Cdx1P18111 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdx1P18111 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx1P18111 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms