Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxb3P09026 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxb3P09026 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxb3P09026 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxb3P09026 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxb3P09026 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hoxb3P09026 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxb3P09026 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Gm14263-201ENSMUST00000117955 746 ntBASIC14.31□□□□□ -0.12
Hoxb3P09026 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Gm13366-201ENSMUST00000122198 970 ntBASIC14.31□□□□□ -0.12
Hoxb3P09026 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Hoxb3P09026 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Gm9726-201ENSMUST00000180321 678 ntBASIC14.31□□□□□ -0.12
Hoxb3P09026 Gm37230-201ENSMUST00000194491 818 ntBASIC14.31□□□□□ -0.12
Hoxb3P09026 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxb3P09026 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.31□□□□□ -0.12
Hoxb3P09026 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC14.31□□□□□ -0.12
Hoxb3P09026 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.31□□□□□ -0.12
Hoxb3P09026 Gm45696-201ENSMUST00000212088 985 ntBASIC14.31□□□□□ -0.12
Hoxb3P09026 Gm18363-201ENSMUST00000221671 730 ntBASIC14.31□□□□□ -0.12
Hoxb3P09026 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hoxb3P09026 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hoxb3P09026 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Hoxb3P09026 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hoxb3P09026 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxb3P09026 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxb3P09026 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxb3P09026 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxb3P09026 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Hoxb3P09026 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.3□□□□□ -0.12
Hoxb3P09026 Mir1897-201ENSMUST00000122581 272 ntBASIC14.3□□□□□ -0.12
Hoxb3P09026 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.3□□□□□ -0.12
Hoxb3P09026 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxb3P09026 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.3□□□□□ -0.12
Hoxb3P09026 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.3□□□□□ -0.12
Hoxb3P09026 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxb3P09026 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.3□□□□□ -0.12
Hoxb3P09026 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxb3P09026 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxb3P09026 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxb3P09026 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Hoxb3P09026 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Hoxb3P09026 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxb3P09026 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.29□□□□□ -0.12
Hoxb3P09026 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Hoxb3P09026 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hoxb3P09026 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxb3P09026 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms