Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Gm8213-201ENSMUST00000118191 441 ntBASIC16.17■□□□□ 0.18
Polr2aP08775 Gm10156-201ENSMUST00000122364 462 ntBASIC16.17■□□□□ 0.18
Polr2aP08775 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Polr2aP08775 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Polr2aP08775 Carlr-201ENSMUST00000181515 2574 ntBASIC16.16■□□□□ 0.18
Polr2aP08775 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2aP08775 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2aP08775 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2aP08775 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2aP08775 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2aP08775 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2aP08775 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.16■□□□□ 0.18
Polr2aP08775 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2aP08775 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.16■□□□□ 0.18
Polr2aP08775 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.16■□□□□ 0.18
Polr2aP08775 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Polr2aP08775 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.16■□□□□ 0.18
Polr2aP08775 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2aP08775 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2aP08775 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2aP08775 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2aP08775 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Polr2aP08775 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2aP08775 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.15■□□□□ 0.18
Polr2aP08775 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Gm22323-201ENSMUST00000103832 109 ntBASIC16.15■□□□□ 0.18
Polr2aP08775 Gm15808-201ENSMUST00000119046 604 ntBASIC16.15■□□□□ 0.18
Polr2aP08775 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.15■□□□□ 0.18
Polr2aP08775 Gm7029-201ENSMUST00000173226 450 ntBASIC16.15■□□□□ 0.18
Polr2aP08775 Gm24420-201ENSMUST00000176676 59 ntBASIC16.15■□□□□ 0.18
Polr2aP08775 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.15■□□□□ 0.18
Polr2aP08775 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.15■□□□□ 0.18
Polr2aP08775 Gm6334-201ENSMUST00000207083 228 ntBASIC16.15■□□□□ 0.18
Polr2aP08775 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.15■□□□□ 0.18
Polr2aP08775 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.15■□□□□ 0.18
Polr2aP08775 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Polr2aP08775 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Rn7s1-201ENSMUST00000174924 300 ntBASIC16.15■□□□□ 0.18
Polr2aP08775 Rn7s2-201ENSMUST00000175032 300 ntBASIC16.15■□□□□ 0.18
Polr2aP08775 Gm26461-201ENSMUST00000175064 290 ntBASIC16.15■□□□□ 0.18
Polr2aP08775 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Polr2aP08775 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2aP08775 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Polr2aP08775 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.14■□□□□ 0.18
Polr2aP08775 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Polr2aP08775 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Polr2aP08775 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.14■□□□□ 0.17
Polr2aP08775 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.14■□□□□ 0.17
Polr2aP08775 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2aP08775 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Polr2aP08775 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2aP08775 Gm1335-201ENSMUST00000121653 386 ntBASIC16.13■□□□□ 0.17
Polr2aP08775 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2aP08775 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2aP08775 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.13■□□□□ 0.17
Polr2aP08775 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2aP08775 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.13■□□□□ 0.17
Polr2aP08775 AC133598.1-201ENSMUST00000224327 660 ntBASIC16.13■□□□□ 0.17
Polr2aP08775 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.13■□□□□ 0.17
Polr2aP08775 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.13■□□□□ 0.17
Polr2aP08775 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2aP08775 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms