Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.06□□□□□ -0.48
CfdP03953 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CfdP03953 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CfdP03953 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CfdP03953 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CfdP03953 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
CfdP03953 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.05□□□□□ -0.48
CfdP03953 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.05□□□□□ -0.48
CfdP03953 Gm10231-201ENSMUST00000181584 441 ntBASIC12.05□□□□□ -0.48
CfdP03953 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Gm10175-202ENSMUST00000208752 441 ntBASIC12.05□□□□□ -0.48
CfdP03953 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.05□□□□□ -0.48
CfdP03953 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.05□□□□□ -0.48
CfdP03953 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CfdP03953 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.05□□□□□ -0.48
CfdP03953 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.05□□□□□ -0.48
CfdP03953 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.05□□□□□ -0.48
CfdP03953 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.05□□□□□ -0.48
CfdP03953 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.05□□□□□ -0.48
CfdP03953 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CfdP03953 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CfdP03953 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CfdP03953 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.04□□□□□ -0.48
CfdP03953 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.04□□□□□ -0.48
CfdP03953 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CfdP03953 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CfdP03953 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.03□□□□□ -0.48
CfdP03953 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CfdP03953 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.03□□□□□ -0.48
CfdP03953 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
CfdP03953 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CfdP03953 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CfdP03953 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
CfdP03953 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CfdP03953 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CfdP03953 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CfdP03953 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CfdP03953 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CfdP03953 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CfdP03953 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CfdP03953 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.03□□□□□ -0.48
CfdP03953 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CfdP03953 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.03□□□□□ -0.48
CfdP03953 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.03□□□□□ -0.48
CfdP03953 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.03□□□□□ -0.48
CfdP03953 Gm9682-201ENSMUST00000197505 556 ntBASIC12.03□□□□□ -0.48
CfdP03953 Olfr286-202ENSMUST00000205305 969 ntBASIC12.03□□□□□ -0.48
CfdP03953 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms