Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01852 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
P01852 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.21□□□□□ -0.29
P01852 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.21□□□□□ -0.29
P01852 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
P01852 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
P01852 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.21□□□□□ -0.29
P01852 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.21□□□□□ -0.29
P01852 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.21□□□□□ -0.29
P01852 Gm24158-201ENSMUST00000175263 71 ntBASIC13.21□□□□□ -0.29
P01852 Gm10253-201ENSMUST00000194270 940 ntBASIC13.21□□□□□ -0.29
P01852 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.21□□□□□ -0.29
P01852 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.21□□□□□ -0.29
P01852 Gm9182-201ENSMUST00000217829 639 ntBASIC13.21□□□□□ -0.29
P01852 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01852 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.21□□□□□ -0.29
P01852 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01852 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
P01852 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01852 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01852 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.21□□□□□ -0.3
P01852 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01852 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.21□□□□□ -0.3
P01852 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01852 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01852 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01852 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
P01852 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.2□□□□□ -0.3
P01852 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.2□□□□□ -0.3
P01852 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
P01852 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
P01852 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.2□□□□□ -0.3
P01852 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
P01852 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
P01852 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01852 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
P01852 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
P01852 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.19□□□□□ -0.3
P01852 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.19□□□□□ -0.3
P01852 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Gm9824-201ENSMUST00000178707 561 ntBASIC13.19□□□□□ -0.3
P01852 Gm7774-201ENSMUST00000200064 533 ntBASIC13.19□□□□□ -0.3
P01852 Olfr286-202ENSMUST00000205305 969 ntBASIC13.19□□□□□ -0.3
P01852 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
P01852 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
P01852 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01852 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms