Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
P01739 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.9□□□□□ -0.67
P01739 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.9□□□□□ -0.67
P01739 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P01739 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P01739 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P01739 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.89□□□□□ -0.67
P01739 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P01739 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.89□□□□□ -0.67
P01739 Gm27301-201ENSMUST00000184012 127 ntBASIC10.89□□□□□ -0.67
P01739 Gm27741-201ENSMUST00000185060 237 ntBASIC10.89□□□□□ -0.67
P01739 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Olfr286-202ENSMUST00000205305 969 ntBASIC10.89□□□□□ -0.67
P01739 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P01739 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P01739 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.89□□□□□ -0.67
P01739 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10.89□□□□□ -0.67
P01739 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P01739 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
P01739 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
P01739 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
P01739 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
P01739 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.88□□□□□ -0.67
P01739 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.88□□□□□ -0.67
P01739 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.88□□□□□ -0.67
P01739 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.88□□□□□ -0.67
P01739 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.88□□□□□ -0.67
P01739 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.88□□□□□ -0.67
P01739 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Psmb5-202ENSMUST00000227257 622 ntBASIC10.88□□□□□ -0.67
P01739 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
P01739 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
P01739 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.88□□□□□ -0.67
P01739 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
P01739 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.88□□□□□ -0.67
P01739 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
P01739 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.88□□□□□ -0.67
P01739 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
P01739 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.88□□□□□ -0.67
P01739 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.88□□□□□ -0.67
P01739 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
P01739 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P01739 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
P01739 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P01739 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P01739 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P01739 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms