Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.55■□□□□ 0.08
Vti1aO89116 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.55■□□□□ 0.08
Vti1aO89116 Gm44344-201ENSMUST00000200287 129 ntBASIC15.55■□□□□ 0.08
Vti1aO89116 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Vti1aO89116 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.55■□□□□ 0.08
Vti1aO89116 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Vti1aO89116 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Vti1aO89116 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
Vti1aO89116 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Vti1aO89116 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Gm9063-201ENSMUST00000223299 582 ntBASIC15.54■□□□□ 0.08
Vti1aO89116 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vti1aO89116 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Vti1aO89116 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.53■□□□□ 0.08
Vti1aO89116 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vti1aO89116 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vti1aO89116 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.53■□□□□ 0.08
Vti1aO89116 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Gm44855-201ENSMUST00000205725 362 ntBASIC15.53■□□□□ 0.08
Vti1aO89116 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vti1aO89116 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.53■□□□□ 0.08
Vti1aO89116 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.53■□□□□ 0.08
Vti1aO89116 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.53■□□□□ 0.08
Vti1aO89116 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Vti1aO89116 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.53■□□□□ 0.08
Vti1aO89116 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.53■□□□□ 0.08
Vti1aO89116 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vti1aO89116 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vti1aO89116 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vti1aO89116 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.52■□□□□ 0.08
Vti1aO89116 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vti1aO89116 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vti1aO89116 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vti1aO89116 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vti1aO89116 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vti1aO89116 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vti1aO89116 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vti1aO89116 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.52■□□□□ 0.08
Vti1aO89116 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vti1aO89116 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.52■□□□□ 0.08
Vti1aO89116 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.52■□□□□ 0.08
Vti1aO89116 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.52■□□□□ 0.08
Vti1aO89116 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vti1aO89116 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vti1aO89116 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.52■□□□□ 0.08
Vti1aO89116 Gm27533-201ENSMUST00000183800 152 ntBASIC15.52■□□□□ 0.08
Vti1aO89116 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vti1aO89116 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.52■□□□□ 0.08
Vti1aO89116 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vti1aO89116 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vti1aO89116 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vti1aO89116 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vti1aO89116 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vti1aO89116 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vti1aO89116 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms