Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hcn1O88704 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.84□□□□□ -0.19
Hcn1O88704 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.84□□□□□ -0.19
Hcn1O88704 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.84□□□□□ -0.19
Hcn1O88704 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Gm6736-201ENSMUST00000166583 948 ntBASIC13.84□□□□□ -0.19
Hcn1O88704 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.84□□□□□ -0.19
Hcn1O88704 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.84□□□□□ -0.19
Hcn1O88704 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hcn1O88704 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.84□□□□□ -0.19
Hcn1O88704 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.84□□□□□ -0.19
Hcn1O88704 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hcn1O88704 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Hcn1O88704 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.83□□□□□ -0.19
Hcn1O88704 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Hcn1O88704 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hcn1O88704 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hcn1O88704 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Hcn1O88704 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hcn1O88704 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.83□□□□□ -0.2
Hcn1O88704 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.83□□□□□ -0.2
Hcn1O88704 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.83□□□□□ -0.2
Hcn1O88704 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.83□□□□□ -0.2
Hcn1O88704 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.83□□□□□ -0.2
Hcn1O88704 Gm10154-201ENSMUST00000084445 354 ntBASIC13.83□□□□□ -0.2
Hcn1O88704 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Celf4-206ENSMUST00000224553 1729 ntBASIC13.83□□□□□ -0.2
Hcn1O88704 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.83□□□□□ -0.2
Hcn1O88704 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Hcn1O88704 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.83□□□□□ -0.2
Hcn1O88704 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.83□□□□□ -0.2
Hcn1O88704 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Hcn1O88704 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn1O88704 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.82□□□□□ -0.2
Hcn1O88704 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.82□□□□□ -0.2
Hcn1O88704 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.82□□□□□ -0.2
Hcn1O88704 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Hcn1O88704 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.82□□□□□ -0.2
Hcn1O88704 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hcn1O88704 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.82□□□□□ -0.2
Hcn1O88704 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.82□□□□□ -0.2
Hcn1O88704 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.82□□□□□ -0.2
Hcn1O88704 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.82□□□□□ -0.2
Hcn1O88704 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.82□□□□□ -0.2
Hcn1O88704 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.82□□□□□ -0.2
Hcn1O88704 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.82□□□□□ -0.2
Hcn1O88704 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms