Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ClppO88696 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.12□□□□□ -0.15
ClppO88696 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.12□□□□□ -0.15
ClppO88696 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
ClppO88696 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.12□□□□□ -0.15
ClppO88696 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ClppO88696 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.12□□□□□ -0.15
ClppO88696 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.12□□□□□ -0.15
ClppO88696 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.12□□□□□ -0.15
ClppO88696 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.12□□□□□ -0.15
ClppO88696 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ClppO88696 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.12□□□□□ -0.15
ClppO88696 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.12□□□□□ -0.15
ClppO88696 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ClppO88696 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ClppO88696 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.12□□□□□ -0.15
ClppO88696 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ClppO88696 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ClppO88696 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ClppO88696 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.11□□□□□ -0.15
ClppO88696 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
ClppO88696 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.11□□□□□ -0.15
ClppO88696 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ClppO88696 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ClppO88696 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ClppO88696 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ClppO88696 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.11□□□□□ -0.15
ClppO88696 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.11□□□□□ -0.15
ClppO88696 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
ClppO88696 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.11□□□□□ -0.15
ClppO88696 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.11□□□□□ -0.15
ClppO88696 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ClppO88696 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ClppO88696 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.11□□□□□ -0.15
ClppO88696 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
ClppO88696 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
ClppO88696 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ClppO88696 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.1□□□□□ -0.15
ClppO88696 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.1□□□□□ -0.15
ClppO88696 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ClppO88696 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.1□□□□□ -0.15
ClppO88696 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ClppO88696 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ClppO88696 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
ClppO88696 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
ClppO88696 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms