Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a20bO88575 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Slc6a20bO88575 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a20bO88575 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.64■□□□□ 0.09
Slc6a20bO88575 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Slc6a20bO88575 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Slc6a20bO88575 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.64■□□□□ 0.09
Slc6a20bO88575 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Slc6a20bO88575 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a20bO88575 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc6a20bO88575 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.63■□□□□ 0.09
Slc6a20bO88575 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Gm5187-201ENSMUST00000117317 991 ntBASIC15.63■□□□□ 0.09
Slc6a20bO88575 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.63■□□□□ 0.09
Slc6a20bO88575 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Mir3102-201ENSMUST00000175555 104 ntBASIC15.63■□□□□ 0.09
Slc6a20bO88575 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.63■□□□□ 0.09
Slc6a20bO88575 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.63■□□□□ 0.09
Slc6a20bO88575 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc6a20bO88575 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.63■□□□□ 0.09
Slc6a20bO88575 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.63■□□□□ 0.09
Slc6a20bO88575 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Gm15240-201ENSMUST00000118156 720 ntBASIC15.62■□□□□ 0.09
Slc6a20bO88575 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.62■□□□□ 0.09
Slc6a20bO88575 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Gm43094-201ENSMUST00000196549 921 ntBASIC15.62■□□□□ 0.09
Slc6a20bO88575 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc6a20bO88575 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.61■□□□□ 0.09
Slc6a20bO88575 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Gm18827-201ENSMUST00000188341 790 ntBASIC15.61■□□□□ 0.09
Slc6a20bO88575 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.61■□□□□ 0.09
Slc6a20bO88575 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Slc6a20bO88575 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.61■□□□□ 0.09
Slc6a20bO88575 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.61■□□□□ 0.09
Slc6a20bO88575 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Gm7399-201ENSMUST00000032395 858 ntBASIC15.61■□□□□ 0.09
Slc6a20bO88575 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Slc6a20bO88575 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc6a20bO88575 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a20bO88575 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Slc6a20bO88575 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a20bO88575 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms