Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.55■□□□□ 0.4
Cops6O88545 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Cops6O88545 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.55■□□□□ 0.4
Cops6O88545 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.55■□□□□ 0.4
Cops6O88545 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.55■□□□□ 0.4
Cops6O88545 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.55■□□□□ 0.4
Cops6O88545 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.55■□□□□ 0.4
Cops6O88545 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.55■□□□□ 0.4
Cops6O88545 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.55■□□□□ 0.4
Cops6O88545 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.55■□□□□ 0.4
Cops6O88545 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Cops6O88545 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Cops6O88545 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops6O88545 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.55■□□□□ 0.4
Cops6O88545 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cops6O88545 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.54■□□□□ 0.4
Cops6O88545 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops6O88545 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops6O88545 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops6O88545 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops6O88545 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops6O88545 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cops6O88545 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops6O88545 Gm18187-201ENSMUST00000196476 984 ntBASIC17.54■□□□□ 0.4
Cops6O88545 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.54■□□□□ 0.4
Cops6O88545 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops6O88545 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops6O88545 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cops6O88545 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cops6O88545 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.53■□□□□ 0.4
Cops6O88545 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cops6O88545 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cops6O88545 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cops6O88545 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.53■□□□□ 0.4
Cops6O88545 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.53■□□□□ 0.4
Cops6O88545 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cops6O88545 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Gm19220-201ENSMUST00000222682 803 ntBASIC17.53■□□□□ 0.4
Cops6O88545 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.53■□□□□ 0.4
Cops6O88545 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cops6O88545 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Cops6O88545 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops6O88545 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cops6O88545 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cops6O88545 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.52■□□□□ 0.4
Cops6O88545 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cops6O88545 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cops6O88545 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.52■□□□□ 0.4
Cops6O88545 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.52■□□□□ 0.4
Cops6O88545 Gm14127-201ENSMUST00000117906 678 ntBASIC17.52■□□□□ 0.4
Cops6O88545 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cops6O88545 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.52■□□□□ 0.4
Cops6O88545 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cops6O88545 Gm43438-201ENSMUST00000198133 379 ntBASIC17.52■□□□□ 0.4
Cops6O88545 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.52■□□□□ 0.4
Cops6O88545 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC17.52■□□□□ 0.4
Cops6O88545 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.52■□□□□ 0.4
Cops6O88545 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.52■□□□□ 0.4
Cops6O88545 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cops6O88545 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cops6O88545 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cops6O88545 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cops6O88545 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms