Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.33□□□□□ -0.28
Cops4O88544 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cops4O88544 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cops4O88544 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cops4O88544 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cops4O88544 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Cops4O88544 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cops4O88544 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.32□□□□□ -0.28
Cops4O88544 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
Cops4O88544 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Cops4O88544 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.32□□□□□ -0.28
Cops4O88544 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Gm43347-201ENSMUST00000200226 580 ntBASIC13.32□□□□□ -0.28
Cops4O88544 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Cops4O88544 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cops4O88544 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cops4O88544 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops4O88544 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.31□□□□□ -0.28
Cops4O88544 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.31□□□□□ -0.28
Cops4O88544 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Cops4O88544 Gm11780-201ENSMUST00000136880 516 ntBASIC13.31□□□□□ -0.28
Cops4O88544 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Cops4O88544 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.31□□□□□ -0.28
Cops4O88544 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.31□□□□□ -0.28
Cops4O88544 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.31□□□□□ -0.28
Cops4O88544 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.31□□□□□ -0.28
Cops4O88544 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cops4O88544 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.31□□□□□ -0.28
Cops4O88544 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops4O88544 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.3□□□□□ -0.28
Cops4O88544 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Cops4O88544 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.3□□□□□ -0.28
Cops4O88544 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms