Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf17O88472 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.34□□□□□ -0.27
Tnfrsf17O88472 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Gm45880-201ENSMUST00000213041 853 ntBASIC13.34□□□□□ -0.27
Tnfrsf17O88472 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf17O88472 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfrsf17O88472 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfrsf17O88472 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Gm37230-201ENSMUST00000194491 818 ntBASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf17O88472 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms