Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ubr1O70481 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Ubr1O70481 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Gm7561-201ENSMUST00000211203 886 ntBASIC18.39■□□□□ 0.53
Ubr1O70481 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Ubr1O70481 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubr1O70481 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC18.39■□□□□ 0.53
Ubr1O70481 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ubr1O70481 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC18.38■□□□□ 0.53
Ubr1O70481 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 AC131690.1-201ENSMUST00000218406 374 ntBASIC18.38■□□□□ 0.53
Ubr1O70481 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ubr1O70481 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.38■□□□□ 0.53
Ubr1O70481 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC18.38■□□□□ 0.53
Ubr1O70481 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC18.38■□□□□ 0.53
Ubr1O70481 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubr1O70481 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC18.37■□□□□ 0.53
Ubr1O70481 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubr1O70481 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.37■□□□□ 0.53
Ubr1O70481 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC18.37■□□□□ 0.53
Ubr1O70481 Gm45331-201ENSMUST00000209868 554 ntBASIC18.37■□□□□ 0.53
Ubr1O70481 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubr1O70481 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.37■□□□□ 0.53
Ubr1O70481 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ubr1O70481 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC18.37■□□□□ 0.53
Ubr1O70481 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubr1O70481 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC18.37■□□□□ 0.53
Ubr1O70481 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubr1O70481 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ubr1O70481 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubr1O70481 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubr1O70481 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubr1O70481 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ubr1O70481 Gm15770-201ENSMUST00000117498 584 ntBASIC18.37■□□□□ 0.53
Ubr1O70481 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ubr1O70481 Gm8584-201ENSMUST00000171982 758 ntBASIC18.37■□□□□ 0.53
Ubr1O70481 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC18.37■□□□□ 0.53
Ubr1O70481 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ubr1O70481 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Ubr1O70481 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubr1O70481 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
Ubr1O70481 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubr1O70481 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC18.36■□□□□ 0.53
Ubr1O70481 Gm27486-201ENSMUST00000184923 80 ntBASIC18.36■□□□□ 0.53
Ubr1O70481 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.36■□□□□ 0.53
Ubr1O70481 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ubr1O70481 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ubr1O70481 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ubr1O70481 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubr1O70481 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubr1O70481 Gm37411-201ENSMUST00000194180 2282 ntBASIC18.36■□□□□ 0.53
Ubr1O70481 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.36■□□□□ 0.53
Ubr1O70481 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Ubr1O70481 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ubr1O70481 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC18.35■□□□□ 0.53
Ubr1O70481 Gm27731-201ENSMUST00000185192 107 ntBASIC18.35■□□□□ 0.53
Ubr1O70481 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ubr1O70481 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Ubr1O70481 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ubr1O70481 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ubr1O70481 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ubr1O70481 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms